Library vs. Library
Genotype + Phenotype
A defining feature of the Zafrens approach is the plurality of application that are enabled around one universal workflow.
Inputs: Cells and beads
Output: Multi-omics and longitudinal imaging (or equivalently, genotype and phenotype)
Our unique capability to link library of Perturbations with Phenotype & Genotype in high-throughput fashion at single cell resolution opens up opportunities for scientific discoveries at a scale never seen before!
Some examples…
Multiple drug discovery steps compressed to one experiment
Input: Reporter cells + Drug bead library
Output: Cell painting; Whole transcriptome sequencing
HLA independent TCR discovery with target selectivity
Input: Single CD8+ T cells; autologous APCs; peptide beads
Output: Killing (cytox); IFNg; CD69; 41BB; TCRa,b sequence
Bispecific discovery in 3-cell coculture w. killing and cytokines
Input: Single CHO cell; primary CD8 cells; OVCAR3 cells
Output: Killing (cytox); IFNg secretion; GrzB secretion; Bispecific antibody sequence
CAR-T ICD library profiling to find ICDs with killing and less cytokine secretion
Input: Single CAR-T cell from a CAR-ICD library; Tumor cells
Output: Serial killing; Repeat killing; IFNg; PD1; TIM3